Dr. Vishal Kothari
Ph.D. (Biotechnology), M.Phil. (Bioinformatics)
I have worked on agri-informatics (“Bioinformatics driven biotic factor analysis of agro-ecosystems” at Gujarat State Biotechnology Mission (GSBTM), Gandhinagar (Gujarat). Here we developed a Decision Support System (DSS) for crop selection and prediction of crop production on the basis of biotic and abiotic parameters combining data from the last 10 years provided by the government of Gujarat (India), 2010.
My Phd thesis was focussed on “Plant Growth Promoting Rhizobacteria; Microbiology and Formulation,” at Saurashtra University, Rajkot (Gujarat). I isolated the microbes from the rhizosphere around the cumin plant to find bio controlling microbes bacillus safensis with ACC deaminase activity which is critical for plants during drought conditions. For the first time, we also performed a whole genome sequence analysis for the same strain and mined genome data for the other PGPR activity. Another biocontrol strain of genus Bacillus was used to find out the compound responsible for the antifungal activity; various formulations were prepared to check long-term stability and to evaluate their PGPR activity, 2014.
As a postdoctoral researcher at Junagadh Agricultural University, my main focus was in genomics, metagenomics, and proteomics for strain improvement in crop production. Here, I completed five fungal genomes, 12 bacterial genomes, and many SRAs that were deposited at NCBI; 2014-2021.
Achievements:
Young Scientist in Biotechnology and Gold medallist, 12+ Year Experience of lead research team on Plant Growth Promoting Rhizobacteria; Microbiology and Formulation.
Research Publication:
Sr No. | Particulars | Number of Articles / Booklets published |
---|---|---|
1 | Research / Policy papers published in International Journal | 09 + 01 |
2 | Research paper published in National Journal | 07 (Published in proceeding) |
3 | Books | 01 |
Publications And Conference Presentations
Internataional Research/ Policy Papers
Kothari V. V, Kothari R.K., Kothari C.R., Bhatt V.D., Nathani N.M., Koringa P.G., Joshi C.G., Vyas B.R.M. (2013) Genome Sequence of Salt-Tolerant Bacillus safensis Strain VK, Isolated from Saline Desert Area of Gujarat, India. Genome announcements 1:2046. (ISSN: 2169-8287, NAAS 9.19)
Bhensdadia D. V, Bhimani H.D., Rawal C.M., Kothari V. V, Raval V.H., Kothari C.R., Patel A.B., Bhatt V.D., Parmar N.R. (2013) Complete Genome Sequence of Escherichia Phage ADB-2 Isolated from a Fecal Sample of Poultry. Genome announcements 1:7–8, (NAAS 11.08)
Faldu P.R., Kothari V. V, Kothari C.R., Rawal C.M., Domadia K.K., Patel P.A., Bhimani H.D., Raval V.H., Parmar N.R. (2014) Draft Genome Sequence of Textile Azo Dye-Decolorizing and -Degrading Pseudomonas aeruginosa Strain PFK10 , Isolated from the Common Effluent Treatment Plant of the Ankleshwar Industrial Area of Gujarat , India. Genome announcements 2:2–3 (NAAS 9.19)
Patel P.A., Kothari V. V, Kothari C.R., Faldu P.R., Domadia K.K., Rawal C.M., Bhimani H.D., Parmar N.R., Nathani N.M. (2014) Draft Genome Sequence of Petroleum Hydrocarbon-Degrading Pseudomonas aeruginosa Strain PK6 , Isolated from the Saurashtra Region of Gujarat , India. Genome announcements 2:2005–2006. (NAAS 9.19)
Kaushik Dave Hetalkumar Panchal, and Vishal Kothari. (2012) Insilco Epitope Analysis of Conventional Influenza Vaccine (CIV), Indian Influenza Strain and 2011– 2012 INFLUENZA Vaccine Strain recommended by WHO. Research & Reviews: Journal of Genomics and Proteomics.1(3):1-13.
H. D. Bhimani, D. V. Bhensdadia, C. M. Rawal, V. V. Kothari, R. K. Kothari, C. R. Kothari and G. C. Bhimani. (2014) Influence of some chemical parameters on decolorization of textile dyes by bacterial strains isolated from waste water treatment plant. African Journal of Microbiology Research 8(11):1213-1220. (ISSN: 1996-0808, NAAS 6.00)
Joshi A. Y. Kothari V.V., Kothari C.R. Bhimani H.D. and Kothari R.K. (2014) Optimization of parameters for decolorization of a textile azo dye, Remazol Black B (RBB) by a newly isolated bacterium, Bacillus thuringiensis BYJ1. African Journal of Microbiology Research 8(47): 3837-3849.(ISSN: 1996-0808 , NAAS 6.00)
Parakhia M.V, Tomar R. S., Kothari V.V., Rathod V., Thakkar J., Dalal H., Bhalara R. and Golakiya B.A. (2014) Genome sequence analysis of Pseudomonas putida MR3, A pesticide degrading bacterium. The Ecoscan 5: 01-04. (ISSN: 0974-0376, NAAS 5.06)
Parmar, K. J., Tomar, R. S., Parakhia,M. V., Malviya. B. J., Rathod,V.M., Thakkar, J. R., Kothari, V. V., Bhatt, A. J., Bhalara, R. L. and Golakiya, B. A. (2014) Isolation and bio-analytical characterization of Chloropyrifos degrading bacteria. Journal of Cell and Tissue Research Vol. 14(3) 4641-4646. (ISSN:0973-0028 ; NAAS 4.38)
Kothari V.V and Vyas BRM. Effect of ACC-deaminase producing Bacillus cereus brm on the growth of Vigna radiata (Mung beans) under salinity stress. Research journal of Biotechnology (In press). (ISSN: 0973-6263; NAAS 6.29)
Bhensdadia D. V, Bhimani H.D., Rawal C.M., Kothari V. V, Raval V.H., Kothari C.R., Patel A.B., Bhatt V.D., Parmar N.R. (2013) Complete Genome Sequence of Escherichia Phage ADB-2 Isolated from a Fecal Sample of Poultry. Genome announcements 1:7–8, (NAAS 11.08)
Faldu P.R., Kothari V. V, Kothari C.R., Rawal C.M., Domadia K.K., Patel P.A., Bhimani H.D., Raval V.H., Parmar N.R. (2014) Draft Genome Sequence of Textile Azo Dye-Decolorizing and -Degrading Pseudomonas aeruginosa Strain PFK10 , Isolated from the Common Effluent Treatment Plant of the Ankleshwar Industrial Area of Gujarat , India. Genome announcements 2:2–3 (NAAS 9.19)
Patel P.A., Kothari V. V, Kothari C.R., Faldu P.R., Domadia K.K., Rawal C.M., Bhimani H.D., Parmar N.R., Nathani N.M. (2014) Draft Genome Sequence of Petroleum Hydrocarbon-Degrading Pseudomonas aeruginosa Strain PK6 , Isolated from the Saurashtra Region of Gujarat , India. Genome announcements 2:2005–2006. (NAAS 9.19)
Kaushik Dave Hetalkumar Panchal, and Vishal Kothari. (2012) Insilco Epitope Analysis of Conventional Influenza Vaccine (CIV), Indian Influenza Strain and 2011– 2012 INFLUENZA Vaccine Strain recommended by WHO. Research & Reviews: Journal of Genomics and Proteomics.1(3):1-13.
H. D. Bhimani, D. V. Bhensdadia, C. M. Rawal, V. V. Kothari, R. K. Kothari, C. R. Kothari and G. C. Bhimani. (2014) Influence of some chemical parameters on decolorization of textile dyes by bacterial strains isolated from waste water treatment plant. African Journal of Microbiology Research 8(11):1213-1220. (ISSN: 1996-0808, NAAS 6.00)
Joshi A. Y. Kothari V.V., Kothari C.R. Bhimani H.D. and Kothari R.K. (2014) Optimization of parameters for decolorization of a textile azo dye, Remazol Black B (RBB) by a newly isolated bacterium, Bacillus thuringiensis BYJ1. African Journal of Microbiology Research 8(47): 3837-3849.(ISSN: 1996-0808 , NAAS 6.00)
Parakhia M.V, Tomar R. S., Kothari V.V., Rathod V., Thakkar J., Dalal H., Bhalara R. and Golakiya B.A. (2014) Genome sequence analysis of Pseudomonas putida MR3, A pesticide degrading bacterium. The Ecoscan 5: 01-04. (ISSN: 0974-0376, NAAS 5.06)
Parmar, K. J., Tomar, R. S., Parakhia,M. V., Malviya. B. J., Rathod,V.M., Thakkar, J. R., Kothari, V. V., Bhatt, A. J., Bhalara, R. L. and Golakiya, B. A. (2014) Isolation and bio-analytical characterization of Chloropyrifos degrading bacteria. Journal of Cell and Tissue Research Vol. 14(3) 4641-4646. (ISSN:0973-0028 ; NAAS 4.38)
Kothari V.V and Vyas BRM. Effect of ACC-deaminase producing Bacillus cereus brm on the growth of Vigna radiata (Mung beans) under salinity stress. Research journal of Biotechnology (In press). (ISSN: 0973-6263; NAAS 6.29)
National Research Papers
Conference proceedings
Bambhaniya K.B., Bhensaniya M.K., Kothari V.V. & Vyas B.R.M. (2014) Biocontrol of plant pathogenic strains Fusarium oxysporum and Alternaria solani with antagonistic rhizobacteria (ISBN: 978-81-929521-0-9)
Kaushik Dave, Vishal Kothari & Ramesh Kothari. (2014) Insilco epitope analysis and comparision of hemaglutinin (ha) for conventional influenza vaccine (civ), 2011- 2012 influenza vaccine strain and 2012- 2013 influenza vaccine strain recommended by WHO (ISBN: 978-81-929521-0-9)
Domadia K. R, Kothari C.R., Kotadiya R.J., Kothari V.V. & R.K. Kothari. (2014) Evaluation of dye decolorization potential of a newly isolated bacterial species under various environmental and nutritional conditions (ISBN: 978-81-929521-0-9)
M. K. Bhensaniya, K. B. Bambhaniya, V. V. Kothari & B. R. M. Vyas. (2014) Heavy metal tolerance and decolourization of textile dyes by potential PGPRstrains (ISBN: 978-81-929521-0-9)
Faldu Priti R., Kothari C.R., Kotadiya R. J., Kothari V. V. & Kothari R.K. (2014) Phytotoxicity assessment of a textile azo dye treated under sequential static-shaking culture conditions (ISBN: 978-81-929521-0-9)
Priyank. A. Patel, Vishal. V. Kothari & Ramesh. K. Kothari. (2014) a study on petroleum hydrocarbon degrading bacteria isolated from saurashtra region of gujarat, india (ISBN: 978-81-929521-0-9)
Kothari V.V.,Kothari R.K. & BRM Vyas.(2014) Formulation of the plant growth promoting Bacillus cereus strain o8 using chitosan-alginate (ISBN: 978-81-929521-0-9)
Bambhaniya K.B., Bhensaniya M.K., Kothari V.V. & Vyas B.R.M. (2014) Biocontrol of plant pathogenic strains Fusarium oxysporum and Alternaria solani with antagonistic rhizobacteria (ISBN: 978-81-929521-0-9)
Kaushik Dave, Vishal Kothari & Ramesh Kothari. (2014) Insilco epitope analysis and comparision of hemaglutinin (ha) for conventional influenza vaccine (civ), 2011- 2012 influenza vaccine strain and 2012- 2013 influenza vaccine strain recommended by WHO (ISBN: 978-81-929521-0-9)
Domadia K. R, Kothari C.R., Kotadiya R.J., Kothari V.V. & R.K. Kothari. (2014) Evaluation of dye decolorization potential of a newly isolated bacterial species under various environmental and nutritional conditions (ISBN: 978-81-929521-0-9)
M. K. Bhensaniya, K. B. Bambhaniya, V. V. Kothari & B. R. M. Vyas. (2014) Heavy metal tolerance and decolourization of textile dyes by potential PGPRstrains (ISBN: 978-81-929521-0-9)
Faldu Priti R., Kothari C.R., Kotadiya R. J., Kothari V. V. & Kothari R.K. (2014) Phytotoxicity assessment of a textile azo dye treated under sequential static-shaking culture conditions (ISBN: 978-81-929521-0-9)
Priyank. A. Patel, Vishal. V. Kothari & Ramesh. K. Kothari. (2014) a study on petroleum hydrocarbon degrading bacteria isolated from saurashtra region of gujarat, india (ISBN: 978-81-929521-0-9)
Kothari V.V.,Kothari R.K. & BRM Vyas.(2014) Formulation of the plant growth promoting Bacillus cereus strain o8 using chitosan-alginate (ISBN: 978-81-929521-0-9)
International level
- Ramesh Kothari, Dhimant Bhensdadia, Charmy Kothari, V.V. Kothari. Isolation and Determination of Polyvalence of E-coli and S. typhimurum Phages and Antibiogram of their Hosts. 4th Congress of European Microbiologists (FEMS-2011).70.
- P.R. Fadlu, C.R. Kothari, V. V. Kothari, C.M. Rawal, R.K.Kothari. Decolorization of Textile Azo Dyes by a Newly Isolated Pseudomonas sp.PFK10 from Common Effluent Treratment Plants (CETP). FEMS-2013. 259.
National level
- Khunt C, Rawal C, Kothari V.V., Kothari CR, Vachharajani K. Enzymatic Potential and Antibiotic Sensitivity of Bacteria Isolated from National Seminar on Biochemistry: A Global Approach from Molecules to Cell -2010. 36
- Bhensadadia D, Bhimani H. Rawal C. Kothari V.V, Kothari CR. RK Kothari. Isolation and Determination of Host Range of Salmonella Phages from Fecal Waste of Poultry. National Seminar on Biochemistry: A Global Approach from Molecules to Cell.2010. 37
- Bhensadadia D.V., S.D. Bhimani, Koringa P. G., Kothari V.V., Kothari C.R.,R.K. Kothari. Study of Coli-phage and their host isolated from poultry faecal. 5th National level Science symposium-2012.58
- Kavan Andharia, Neha Barad, V.V. Kothari Deepali Hindocha, Shivani Pathak, Neha Vanjara Usmangani Tabani, R.K. Kothari. Isolation an screening of plant growth promoting rhizobacteria.5th National level Science symposium-2012. 59
- V.V.Kothari, R.K. Kothari, C. R. Kothari, B.R.M. Vyas. Isolation, Screening and formulation of rhizobacteria for the biodynamic farming. 5th National level Science symposium-2012. 60
- R.K. Kothari. Rawal Chirantan., Kothari C.R. Raval Vikram & Kothari V.V. Production, Purification and Characterization of Phytase from Pseudomonas aerigenosa CR-25. 7th National level Science symposium-2014. 2
- M. K. Bhensaniya, K. B. Bambhaniya, V. V. Kothari & B. R. M. Vyas. (2014) Heavy metal tolerance and decolourization of textile dyes by potential PGPRstrains
- Faldu Priti R., Kothari C.R., Kotadiya R. J., Kothari V. V. & Kothari R.K. (2014) Phytotoxicity assessment of a textile azo dye treated under sequential static-shaking culture conditions. 7th National level Science symposium-2014. 26
- Domadia K. R, Kothari C.R., Kotadiya R.J., Kothari V.V. & R.K. Kothari. (2014) Evaluation of dye decolorization potential of a newly isolated bacterial species under various environmental and nutritional conditions. 7th National level Science symposium-2014. 28
- P. A. Patel, V. V. Kothari & Ramesh. K. Kothari. (2014) a study on petroleum hydrocarbon degrading bacteria isolated from saurashtra region of Gujarat, india. 7th National level Science symposium-2014. 74
- Kothari V.V., Kothari R.K. & BRM Vyas. (2014) Formulation of the plant growth promoting Bacillus cereus strain o8 using chitosan-alginate. 7th National level Science symposium-2014. 7
- Kaushik Dave, Vishal Kothari & Ramesh Kothari. (2014) Insilco epitope analysis and comparison of hemaglutinin (ha) for conventional influenza vaccine (civ), 2011- 2012 influenza vaccine strain and 2012- 2013 influenza vaccine strain recommended by WHO. 7th National level Science symposium-2014.80
- Tomar R. S., Parakhia M.V, Thakkar J., Rathod V., Kothari V.V., Dalal H., Akanxa saxena and Golakiya B.A. Linkage Mapping and identification of major QTL responsible for wilt resistance in castor (Ricinus cumminis L.) National conference of biotechnology for sustainable agriculture -2014.10
Books Publication
- “Biotic Factor Management for the Sustainable Agricultural Development: a bioinformatics approach” by Vishal Kothari and Rajesh Patel. LABERT Acadamic Publication, Germany (https://www.lap-publishing.com) (ISBN 978-3-659-42623-0)